Atomistry » Potassium » PDB 1gup-1k4c » 1k28
Atomistry »
  Potassium »
    PDB 1gup-1k4c »
      1k28 »

Potassium in PDB 1k28: The Structure of the Bacteriophage T4 Cell-Puncturing Device

Enzymatic activity of The Structure of the Bacteriophage T4 Cell-Puncturing Device

All present enzymatic activity of The Structure of the Bacteriophage T4 Cell-Puncturing Device:
3.2.1.17;

Protein crystallography data

The structure of The Structure of the Bacteriophage T4 Cell-Puncturing Device, PDB code: 1k28 was solved by S.Kanamaru, P.G.Leiman, V.A.Kostyuchenko, P.R.Chipman, V.V.Mesyanzhinov, F.Arisaka, M.G.Rossmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 139.261, 139.261, 381.998, 90.00, 90.00, 120.00
R / Rfree (%) 21.1 / 28

Potassium Binding Sites:

The binding sites of Potassium atom in the The Structure of the Bacteriophage T4 Cell-Puncturing Device (pdb code 1k28). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the The Structure of the Bacteriophage T4 Cell-Puncturing Device, PDB code: 1k28:

Potassium binding site 1 out of 1 in 1k28

Go back to Potassium Binding Sites List in 1k28
Potassium binding site 1 out of 1 in the The Structure of the Bacteriophage T4 Cell-Puncturing Device


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of The Structure of the Bacteriophage T4 Cell-Puncturing Device within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K585

b:48.9
occ:0.33
O A:HOH799 2.6 50.3 1.0
O A:HOH885 2.6 44.9 1.0
OE1 A:GLU552 4.0 43.0 1.0
OE2 A:GLU552 4.5 37.6 1.0
CD A:GLU552 4.7 40.0 1.0
CH2 A:TRP550 4.9 47.5 1.0

Reference:

S.Kanamaru, P.G.Leiman, V.A.Kostyuchenko, P.R.Chipman, V.V.Mesyanzhinov, F.Arisaka, M.G.Rossmann. Structure of the Cell-Puncturing Device of Bacteriophage T4. Nature V. 415 553 2002.
ISSN: ISSN 0028-0836
PubMed: 11823865
DOI: 10.1038/415553A
Page generated: Sun Dec 13 22:44:55 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy