Atomistry » Potassium » PDB 1d7v-1gmk » 1gjv
Atomistry »
  Potassium »
    PDB 1d7v-1gmk »
      1gjv »

Potassium in PDB 1gjv: Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S

Enzymatic activity of Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S

All present enzymatic activity of Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S:
2.7.1.115;

Protein crystallography data

The structure of Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S, PDB code: 1gjv was solved by M.Machius, J.L.Chuang, M.R.Wynn, D.R.Tomchick, D.T.Chuang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.94 / 2.70
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 127.722, 127.722, 74.314, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 26.9

Other elements in 1gjv:

The structure of Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Chlorine (Cl) 5 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S (pdb code 1gjv). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S, PDB code: 1gjv:

Potassium binding site 1 out of 1 in 1gjv

Go back to Potassium Binding Sites List in 1gjv
Potassium binding site 1 out of 1 in the Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Branched-Chain Alpha-Ketoacid Dehydrogenase Kinase (Bck) Complxed with Atp-Gamma-S within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1380

b:52.5
occ:1.00
 O A:ASP300 2.8 53.8 1.0
O A:VAL298 2.9 54.5 1.0
O A:PHE303 2.9 55.5 1.0
O2A A:AGS1383 3.0 53.2 1.0
O A:GLY337 3.1 56.5 1.0
C5' A:AGS1383 3.6 52.9 1.0
C A:VAL298 3.7 54.3 1.0
C A:PHE303 3.7 56.4 1.0
CD A:PRO341 3.7 44.3 1.0
CB A:PHE303 3.7 58.4 1.0
N A:PHE303 3.7 55.9 1.0
C A:GLY337 3.7 57.7 1.0
CA A:PHE303 3.9 56.7 1.0
C A:ASP300 3.9 53.5 1.0
CA A:GLY337 4.0 59.4 1.0
CG A:PRO341 4.1 44.7 1.0
N A:ASP300 4.1 50.0 1.0
O A:ARG297 4.1 62.2 1.0
PA A:AGS1383 4.2 57.3 1.0
CA A:VAL298 4.2 56.5 1.0
O5' A:AGS1383 4.3 55.3 1.0
CD2 A:PHE303 4.5 60.4 1.0
C A:MET299 4.5 49.1 1.0
N A:MET299 4.5 51.0 1.0
O3A A:AGS1383 4.5 61.4 1.0
CG A:PHE303 4.6 60.8 1.0
N A:HIS302 4.6 56.6 1.0
CA A:ASP300 4.6 52.4 1.0
C A:HIS302 4.7 56.5 1.0
CA A:MET299 4.7 49.1 1.0
N A:PHE338 4.7 55.6 1.0
C4' A:AGS1383 4.8 52.6 1.0
N A:THR304 4.8 56.8 1.0
CA A:TYR301 4.8 54.6 1.0
C A:TYR301 4.9 56.0 1.0
N A:TYR301 4.9 53.6 1.0
CB A:LEU340 5.0 42.3 1.0

Reference:

M.Machius, J.L.Chuang, M.R.Wynn, D.R.Tomchick, D.T.Chuang. Structure of Rat Bckd Kinase: Nucleotide-Induced Domain Communication in A Mitochondrial Protein Kinase. Proc.Natl.Acad.Sci.Usa V. 98 11218 2001.
ISSN: ISSN 0027-8424
PubMed: 11562470
DOI: 10.1073/PNAS.201220098
Page generated: Mon Aug 12 04:30:59 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy