Potassium in PDB 8xmh: Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
Other elements in 8xmh:
The structure of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis also contains other interesting chemical elements:
Potassium Binding Sites:
The binding sites of Potassium atom in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
(pdb code 8xmh). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the
Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis, PDB code: 8xmh:
Jump to Potassium binding site number:
1;
2;
3;
4;
Potassium binding site 1 out
of 4 in 8xmh
Go back to
Potassium Binding Sites List in 8xmh
Potassium binding site 1 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:K501
b:12.2
occ:1.00
|
O
|
I:ASN175
|
2.8
|
6.9
|
1.0
|
O
|
I:THR61
|
2.8
|
6.0
|
1.0
|
O
|
I:ALA279
|
2.8
|
7.3
|
1.0
|
O
|
I:THR390
|
2.8
|
5.8
|
1.0
|
O
|
I:VAL391
|
2.8
|
4.4
|
1.0
|
O
|
I:THR278
|
2.9
|
7.6
|
1.0
|
O
|
I:ALA176
|
3.0
|
7.1
|
1.0
|
O
|
I:VAL60
|
3.2
|
7.3
|
1.0
|
C
|
I:ALA176
|
3.4
|
7.1
|
1.0
|
C
|
I:ASN175
|
3.4
|
6.9
|
1.0
|
C
|
I:ALA279
|
3.5
|
7.3
|
1.0
|
C
|
I:VAL391
|
3.5
|
4.4
|
1.0
|
C
|
I:THR61
|
3.5
|
6.0
|
1.0
|
CA
|
I:ALA176
|
3.6
|
7.1
|
1.0
|
C
|
I:THR390
|
3.8
|
5.8
|
1.0
|
CA
|
I:VAL391
|
3.8
|
4.4
|
1.0
|
N
|
I:ALA176
|
3.8
|
7.1
|
1.0
|
CA
|
I:THR61
|
3.8
|
6.0
|
1.0
|
CA
|
I:ALA279
|
4.0
|
7.3
|
1.0
|
C
|
I:THR278
|
4.0
|
7.6
|
1.0
|
C
|
I:VAL60
|
4.1
|
7.3
|
1.0
|
N
|
I:VAL391
|
4.2
|
4.4
|
1.0
|
N
|
I:GLY177
|
4.3
|
9.7
|
1.0
|
N
|
I:THR61
|
4.4
|
6.0
|
1.0
|
N
|
I:GLY280
|
4.4
|
7.5
|
1.0
|
N
|
I:ALA279
|
4.5
|
7.3
|
1.0
|
CA
|
I:ASN175
|
4.6
|
6.9
|
1.0
|
N
|
I:GLY62
|
4.6
|
8.2
|
1.0
|
N
|
I:GLY392
|
4.6
|
6.6
|
1.0
|
CB
|
I:ASN175
|
4.8
|
6.9
|
1.0
|
CA
|
I:GLY280
|
4.8
|
7.5
|
1.0
|
CA
|
I:GLY177
|
4.9
|
9.7
|
1.0
|
OG1
|
I:THR278
|
5.0
|
7.6
|
1.0
|
CA
|
I:THR390
|
5.0
|
5.8
|
1.0
|
|
Potassium binding site 2 out
of 4 in 8xmh
Go back to
Potassium Binding Sites List in 8xmh
Potassium binding site 2 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:K501
b:13.9
occ:1.00
|
O
|
J:ASN175
|
2.8
|
7.0
|
1.0
|
O
|
J:THR61
|
2.8
|
5.9
|
1.0
|
O
|
J:ALA279
|
2.8
|
7.4
|
1.0
|
O
|
J:THR390
|
2.8
|
6.5
|
1.0
|
O
|
J:VAL391
|
2.8
|
3.1
|
1.0
|
O
|
J:THR278
|
2.9
|
7.3
|
1.0
|
O
|
J:ALA176
|
3.0
|
7.3
|
1.0
|
O
|
J:VAL60
|
3.2
|
7.7
|
1.0
|
C
|
J:ALA176
|
3.4
|
7.3
|
1.0
|
C
|
J:ASN175
|
3.4
|
7.0
|
1.0
|
C
|
J:ALA279
|
3.5
|
7.4
|
1.0
|
C
|
J:THR61
|
3.5
|
5.9
|
1.0
|
C
|
J:VAL391
|
3.5
|
3.1
|
1.0
|
CA
|
J:ALA176
|
3.6
|
7.3
|
1.0
|
C
|
J:THR390
|
3.8
|
6.5
|
1.0
|
CA
|
J:VAL391
|
3.8
|
3.1
|
1.0
|
N
|
J:ALA176
|
3.8
|
7.3
|
1.0
|
CA
|
J:THR61
|
3.8
|
5.9
|
1.0
|
CA
|
J:ALA279
|
4.0
|
7.4
|
1.0
|
C
|
J:THR278
|
4.0
|
7.3
|
1.0
|
C
|
J:VAL60
|
4.1
|
7.7
|
1.0
|
N
|
J:VAL391
|
4.2
|
3.1
|
1.0
|
N
|
J:GLY177
|
4.3
|
9.8
|
1.0
|
N
|
J:THR61
|
4.4
|
5.9
|
1.0
|
N
|
J:GLY280
|
4.4
|
7.7
|
1.0
|
N
|
J:ALA279
|
4.5
|
7.4
|
1.0
|
CA
|
J:ASN175
|
4.6
|
7.0
|
1.0
|
N
|
J:GLY62
|
4.6
|
8.8
|
1.0
|
N
|
J:GLY392
|
4.6
|
7.0
|
1.0
|
CB
|
J:ASN175
|
4.8
|
7.0
|
1.0
|
CA
|
J:GLY280
|
4.8
|
7.7
|
1.0
|
CA
|
J:GLY177
|
4.9
|
9.8
|
1.0
|
OG1
|
J:THR278
|
5.0
|
7.3
|
1.0
|
CA
|
J:THR390
|
5.0
|
6.5
|
1.0
|
|
Potassium binding site 3 out
of 4 in 8xmh
Go back to
Potassium Binding Sites List in 8xmh
Potassium binding site 3 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:K501
b:21.6
occ:1.00
|
O
|
K:ASN175
|
2.8
|
17.9
|
1.0
|
O
|
K:THR61
|
2.8
|
14.9
|
1.0
|
O
|
K:ALA279
|
2.8
|
15.7
|
1.0
|
O
|
K:THR390
|
2.8
|
13.1
|
1.0
|
O
|
K:VAL391
|
2.8
|
12.7
|
1.0
|
O
|
K:THR278
|
2.9
|
16.1
|
1.0
|
O
|
K:ALA176
|
3.0
|
16.5
|
1.0
|
O
|
K:VAL60
|
3.2
|
17.4
|
1.0
|
C
|
K:ALA176
|
3.4
|
16.5
|
1.0
|
C
|
K:ASN175
|
3.4
|
17.9
|
1.0
|
C
|
K:ALA279
|
3.5
|
15.7
|
1.0
|
C
|
K:VAL391
|
3.5
|
12.7
|
1.0
|
C
|
K:THR61
|
3.5
|
14.9
|
1.0
|
CA
|
K:ALA176
|
3.6
|
16.5
|
1.0
|
C
|
K:THR390
|
3.8
|
13.1
|
1.0
|
CA
|
K:VAL391
|
3.8
|
12.7
|
1.0
|
N
|
K:ALA176
|
3.8
|
16.5
|
1.0
|
CA
|
K:THR61
|
3.8
|
14.9
|
1.0
|
CA
|
K:ALA279
|
4.0
|
15.7
|
1.0
|
C
|
K:THR278
|
4.0
|
16.1
|
1.0
|
C
|
K:VAL60
|
4.1
|
17.4
|
1.0
|
N
|
K:VAL391
|
4.2
|
12.7
|
1.0
|
N
|
K:GLY177
|
4.3
|
19.1
|
1.0
|
N
|
K:THR61
|
4.4
|
14.9
|
1.0
|
N
|
K:GLY280
|
4.4
|
16.3
|
1.0
|
N
|
K:ALA279
|
4.5
|
15.7
|
1.0
|
CA
|
K:ASN175
|
4.6
|
17.9
|
1.0
|
N
|
K:GLY62
|
4.6
|
14.5
|
1.0
|
N
|
K:GLY392
|
4.6
|
12.1
|
1.0
|
CB
|
K:ASN175
|
4.8
|
17.9
|
1.0
|
CA
|
K:GLY280
|
4.8
|
16.3
|
1.0
|
CA
|
K:GLY177
|
4.9
|
19.1
|
1.0
|
OG1
|
K:THR278
|
5.0
|
16.1
|
1.0
|
CA
|
K:THR390
|
5.0
|
13.1
|
1.0
|
|
Potassium binding site 4 out
of 4 in 8xmh
Go back to
Potassium Binding Sites List in 8xmh
Potassium binding site 4 out
of 4 in the Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:K501
b:22.0
occ:1.00
|
O
|
L:ASN175
|
2.8
|
18.1
|
1.0
|
O
|
L:THR61
|
2.8
|
14.9
|
1.0
|
O
|
L:ALA279
|
2.8
|
16.3
|
1.0
|
O
|
L:THR390
|
2.8
|
13.1
|
1.0
|
O
|
L:VAL391
|
2.8
|
12.7
|
1.0
|
O
|
L:THR278
|
2.9
|
16.0
|
1.0
|
O
|
L:ALA176
|
3.0
|
16.7
|
1.0
|
O
|
L:VAL60
|
3.2
|
17.6
|
1.0
|
C
|
L:ALA176
|
3.4
|
16.7
|
1.0
|
C
|
L:ASN175
|
3.4
|
18.1
|
1.0
|
C
|
L:ALA279
|
3.5
|
16.3
|
1.0
|
C
|
L:VAL391
|
3.5
|
12.7
|
1.0
|
C
|
L:THR61
|
3.5
|
14.9
|
1.0
|
CA
|
L:ALA176
|
3.6
|
16.7
|
1.0
|
C
|
L:THR390
|
3.8
|
13.1
|
1.0
|
CA
|
L:VAL391
|
3.8
|
12.7
|
1.0
|
N
|
L:ALA176
|
3.8
|
16.7
|
1.0
|
CA
|
L:THR61
|
3.8
|
14.9
|
1.0
|
CA
|
L:ALA279
|
4.0
|
16.3
|
1.0
|
C
|
L:THR278
|
4.0
|
16.0
|
1.0
|
C
|
L:VAL60
|
4.1
|
17.6
|
1.0
|
N
|
L:VAL391
|
4.2
|
12.7
|
1.0
|
N
|
L:GLY177
|
4.3
|
19.0
|
1.0
|
N
|
L:THR61
|
4.4
|
14.9
|
1.0
|
N
|
L:GLY280
|
4.4
|
16.0
|
1.0
|
N
|
L:ALA279
|
4.5
|
16.3
|
1.0
|
CA
|
L:ASN175
|
4.6
|
18.1
|
1.0
|
N
|
L:GLY62
|
4.6
|
14.6
|
1.0
|
N
|
L:GLY392
|
4.6
|
11.8
|
1.0
|
CB
|
L:ASN175
|
4.8
|
18.1
|
1.0
|
CA
|
L:GLY280
|
4.8
|
16.0
|
1.0
|
CA
|
L:GLY177
|
4.9
|
19.0
|
1.0
|
OG1
|
L:THR278
|
5.0
|
16.0
|
1.0
|
CA
|
L:THR390
|
5.0
|
13.1
|
1.0
|
|
Reference:
Y.K.Chang,
W.T.Chiang,
N.J.Hu,
M.D.Tsai.
Potassium Transporter Ktrab From Bacillus Subtilis in Atp-Bound State with Addition of Edta and Egta, Vertical C2 Symmetry Axis To Be Published.
Page generated: Tue Aug 13 01:18:30 2024
|