Atomistry » Potassium » PDB 8u5r-8x70 » 8ue9
Atomistry »
  Potassium »
    PDB 8u5r-8x70 »
      8ue9 »

Potassium in PDB 8ue9: Structure of Trek-1CG*:CAT335

Protein crystallography data

The structure of Structure of Trek-1CG*:CAT335, PDB code: 8ue9 was solved by A.Mondal, H.Lee, D.L.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.62 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.069, 119.776, 129.708, 90, 90, 90
R / Rfree (%) 26.8 / 30.6

Other elements in 8ue9:

The structure of Structure of Trek-1CG*:CAT335 also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Cadmium (Cd) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Trek-1CG*:CAT335 (pdb code 8ue9). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 5 binding sites of Potassium where determined in the Structure of Trek-1CG*:CAT335, PDB code: 8ue9:
Jump to Potassium binding site number: 1; 2; 3; 4; 5;

Potassium binding site 1 out of 5 in 8ue9

Go back to Potassium Binding Sites List in 8ue9
Potassium binding site 1 out of 5 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K605

b:88.4
occ:1.00
 O B:THR251 2.9 88.0 1.0
OG1 A:THR142 2.9 110.4 1.0
OG1 B:THR251 2.9 92.9 1.0
OG1 A:THR251 2.9 92.2 1.0
O A:THR251 2.9 84.6 1.0
OG1 B:THR142 2.9 95.5 1.0
O A:THR142 3.2 115.0 1.0
O B:THR142 3.3 89.6 1.0
CB A:THR142 3.3 81.0 1.0
CB A:THR251 3.4 83.4 1.0
CB B:THR251 3.4 81.6 1.0
CB B:THR142 3.4 66.0 1.0
K A:K608 3.6 102.5 1.0
C B:THR251 3.8 86.0 1.0
C A:THR251 3.8 85.3 1.0
C A:THR142 4.0 106.6 1.0
C B:THR142 4.0 83.2 1.0
CA A:THR251 4.2 83.4 1.0
CA B:THR251 4.2 102.4 1.0
CA A:THR142 4.3 88.3 1.0
CA B:THR142 4.4 93.3 1.0
CG2 A:THR142 4.4 83.9 1.0
CG2 B:THR142 4.5 83.1 1.0
CG2 A:THR251 4.6 99.8 1.0
CG2 B:THR251 4.6 86.3 1.0
K A:K609 4.8 140.7 1.0
N B:ILE252 4.8 98.8 1.0
O B:THR250 4.9 98.2 1.0
N A:ILE252 4.9 81.1 1.0
O A:THR250 4.9 113.1 1.0

Potassium binding site 2 out of 5 in 8ue9

Go back to Potassium Binding Sites List in 8ue9
Potassium binding site 2 out of 5 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K606

b:103.2
occ:1.00
 O A:PHE254 2.8 105.9 1.0
O B:PHE254 2.8 90.8 1.0
O A:PHE145 2.9 102.4 1.0
O B:GLY144 2.9 104.1 1.0
O B:PHE145 2.9 110.5 1.0
O A:GLY144 3.0 103.2 1.0
O A:GLY253 3.1 91.0 1.0
O B:GLY253 3.2 94.4 1.0
C B:PHE145 3.4 108.5 1.0
C A:PHE145 3.4 95.4 1.0
K A:K607 3.6 95.1 1.0
C A:PHE254 3.6 95.7 1.0
C B:PHE254 3.6 111.9 1.0
C B:GLY144 4.0 100.6 1.0
CA A:PHE145 4.0 91.5 1.0
CA B:PHE145 4.1 97.0 1.0
C A:GLY144 4.1 101.3 1.0
N B:GLY146 4.1 112.4 1.0
CA A:PHE254 4.1 89.9 1.0
N A:GLY146 4.2 99.8 1.0
CA B:PHE254 4.2 109.5 1.0
C A:GLY253 4.2 85.0 1.0
CA B:GLY146 4.3 94.5 1.0
C B:GLY253 4.3 94.9 1.0
CA A:GLY146 4.4 105.3 1.0
N A:GLY255 4.5 94.8 1.0
N B:GLY255 4.5 110.2 1.0
N B:PHE145 4.5 103.6 1.0
N A:PHE145 4.6 103.3 1.0
N A:PHE254 4.7 85.1 1.0
N B:PHE254 4.8 131.6 1.0
CA A:GLY255 4.9 97.4 1.0
CA B:GLY255 4.9 93.5 1.0

Potassium binding site 3 out of 5 in 8ue9

Go back to Potassium Binding Sites List in 8ue9
Potassium binding site 3 out of 5 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K607

b:95.1
occ:1.00
 O B:GLY144 2.7 104.1 1.0
O A:GLY144 2.7 103.2 1.0
O A:ILE252 2.7 82.7 1.0
O A:GLY253 2.7 91.0 1.0
O B:GLY253 2.8 94.4 1.0
K A:K608 2.8 102.5 1.0
O B:ILE252 2.8 93.5 1.0
C B:GLY144 3.4 100.6 1.0
C A:GLY144 3.4 101.3 1.0
K A:K606 3.6 103.2 1.0
C A:GLY253 3.6 85.0 1.0
C B:GLY253 3.7 94.9 1.0
N B:GLY144 3.7 90.3 1.0
CA B:GLY144 3.7 95.7 1.0
N A:GLY144 3.7 91.8 1.0
CA A:GLY144 3.8 81.3 1.0
C A:ILE252 3.9 91.2 1.0
C B:ILE252 3.9 85.4 1.0
CA A:GLY253 4.0 88.7 1.0
CA B:GLY253 4.1 113.0 1.0
N A:PHE145 4.4 103.3 1.0
N A:GLY253 4.4 88.4 1.0
N B:PHE145 4.4 103.6 1.0
N B:GLY253 4.5 102.6 1.0
C A:ILE143 4.6 104.8 1.0
C B:ILE143 4.6 99.6 1.0
N A:PHE254 4.6 85.1 1.0
N B:PHE254 4.7 131.6 1.0
O B:THR142 4.7 89.6 1.0
O A:THR142 4.8 115.0 1.0
CA A:PHE145 4.8 91.5 1.0
CA B:PHE145 4.9 97.0 1.0
O A:THR251 5.0 84.6 1.0

Potassium binding site 4 out of 5 in 8ue9

Go back to Potassium Binding Sites List in 8ue9
Potassium binding site 4 out of 5 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K608

b:102.5
occ:1.00
 O A:THR142 2.6 115.0 1.0
O A:THR251 2.7 84.6 1.0
O B:THR142 2.7 89.6 1.0
K A:K607 2.8 95.1 1.0
O B:ILE252 2.8 93.5 1.0
O A:ILE252 2.8 82.7 1.0
O B:THR251 2.8 88.0 1.0
C A:ILE252 3.5 91.2 1.0
C B:ILE252 3.6 85.4 1.0
K A:K605 3.6 88.4 1.0
N A:GLY144 3.7 91.8 1.0
N B:GLY144 3.8 90.3 1.0
C A:THR251 3.8 85.3 1.0
C A:THR142 3.8 106.6 1.0
C B:THR142 3.9 83.2 1.0
C B:THR251 4.0 86.0 1.0
CA A:ILE252 4.1 73.8 1.0
CA B:ILE252 4.1 98.0 1.0
CA A:ILE143 4.2 99.9 1.0
C A:ILE143 4.4 104.8 1.0
CA B:ILE143 4.4 91.0 1.0
N A:ILE252 4.4 81.1 1.0
N A:GLY253 4.5 88.4 1.0
N A:ILE143 4.5 99.8 1.0
N B:ILE252 4.5 98.8 1.0
C B:ILE143 4.5 99.6 1.0
CA A:GLY144 4.5 81.3 1.0
N B:GLY253 4.6 102.6 1.0
CA B:GLY144 4.6 95.7 1.0
N B:ILE143 4.6 88.6 1.0
CA A:GLY253 4.8 88.7 1.0
O A:GLY253 4.8 91.0 1.0
O B:GLY253 4.8 94.4 1.0
O A:GLY144 4.9 103.2 1.0
CA B:GLY253 4.9 113.0 1.0
O B:GLY144 4.9 104.1 1.0
CA A:THR142 4.9 88.3 1.0
CA A:THR251 5.0 83.4 1.0
C A:GLY144 5.0 101.3 1.0
CA B:THR142 5.0 93.3 1.0

Potassium binding site 5 out of 5 in 8ue9

Go back to Potassium Binding Sites List in 8ue9
Potassium binding site 5 out of 5 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K609

b:140.7
occ:1.00
 OG1 A:THR142 4.4 110.4 1.0
OG1 A:THR251 4.5 92.2 1.0
OG1 B:THR251 4.7 92.9 1.0
K A:K605 4.8 88.4 1.0

Reference:

A.Mondal, H.Lee, D.L.Minor. Structure of Trek-1(S131C Mutant) with ML335 To Be Published.
Page generated: Tue Aug 13 01:05:32 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy