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Potassium in PDB 8thn: Kcsa M96V Mutant with Y78ESTER in High K+

Protein crystallography data

The structure of Kcsa M96V Mutant with Y78ESTER in High K+, PDB code: 8thn was solved by R.Reddi, F.I.Valiyaveetil, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.01 / 2.90
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 155.587, 155.587, 75.718, 90, 90, 90
R / Rfree (%) 24.6 / 27.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Kcsa M96V Mutant with Y78ESTER in High K+ (pdb code 8thn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Kcsa M96V Mutant with Y78ESTER in High K+, PDB code: 8thn:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 1 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K201

b:39.5
occ:0.25
O C:TYF78 2.8 10.2 1.0
O C:GLY77 3.1 55.9 1.0
C C:TYF78 3.5 17.7 1.0
CA C:TYF78 4.2 19.2 1.0
C C:GLY77 4.2 53.4 1.0
N C:GLY79 4.3 38.8 1.0
O4 C:TYF78 4.5 13.6 1.0
K C:K204 4.5 76.2 0.2
CA C:GLY79 4.5 38.8 1.0

Potassium binding site 2 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 2 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K202

b:41.8
occ:0.25
O C:VAL76 2.7 51.4 1.0
O C:THR75 3.2 39.8 1.0
K C:K203 3.6 48.2 0.2
C C:VAL76 3.6 51.4 1.0
CA C:VAL76 4.2 49.0 1.0
C C:THR75 4.2 44.6 1.0
O C:GLY77 4.5 55.9 1.0
N C:GLY77 4.6 57.5 1.0
N C:VAL76 4.8 46.0 1.0
CA C:GLY77 4.9 59.0 1.0
C C:GLY77 5.0 53.4 1.0

Potassium binding site 3 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 3 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K203

b:48.2
occ:0.25
O C:THR75 2.8 39.8 1.0
OG1 C:THR75 3.2 38.1 1.0
K C:K202 3.6 41.8 0.2
CB C:THR75 3.8 46.5 1.0
C C:THR75 3.9 44.6 1.0
C11 C:TBA205 4.3 24.6 0.2
C41 C:TBA205 4.3 24.7 0.2
CA C:THR75 4.5 45.6 1.0
N C:VAL76 4.8 46.0 1.0
N1 C:TBA205 5.0 24.7 0.2

Potassium binding site 4 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 4 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K204

b:76.2
occ:0.25
O C:TYF78 4.2 10.2 1.0
K C:K201 4.5 39.5 0.2
CA C:GLY79 4.7 38.8 1.0

Reference:

R.Reddi, S.Chatterjee, K.Matulef, A.Gustafson, L.Gao, F.I.Valiyaveetil. A Facile Approach For Incorporating Tyrosine Esters to Probe Ion-Binding Sites and Backbone Hydrogen Bonds. J.Biol.Chem. V. 300 05517 2023.
ISSN: ESSN 1083-351X
PubMed: 38042487
DOI: 10.1016/J.JBC.2023.105517
Page generated: Tue Aug 13 00:58:42 2024

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