Atomistry » Potassium » PDB 8rgt-8tjj » 8thn
Atomistry »
  Potassium »
    PDB 8rgt-8tjj »
      8thn »

Potassium in PDB 8thn: Kcsa M96V Mutant with Y78ESTER in High K+

Protein crystallography data

The structure of Kcsa M96V Mutant with Y78ESTER in High K+, PDB code: 8thn was solved by R.Reddi, F.I.Valiyaveetil, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.01 / 2.90
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 155.587, 155.587, 75.718, 90, 90, 90
R / Rfree (%) 24.6 / 27.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Kcsa M96V Mutant with Y78ESTER in High K+ (pdb code 8thn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Kcsa M96V Mutant with Y78ESTER in High K+, PDB code: 8thn:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 1 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K201

b:39.5
occ:0.25
O C:TYF78 2.8 10.2 1.0
O C:GLY77 3.1 55.9 1.0
C C:TYF78 3.5 17.7 1.0
CA C:TYF78 4.2 19.2 1.0
C C:GLY77 4.2 53.4 1.0
N C:GLY79 4.3 38.8 1.0
O4 C:TYF78 4.5 13.6 1.0
K C:K204 4.5 76.2 0.2
CA C:GLY79 4.5 38.8 1.0

Potassium binding site 2 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 2 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K202

b:41.8
occ:0.25
O C:VAL76 2.7 51.4 1.0
O C:THR75 3.2 39.8 1.0
K C:K203 3.6 48.2 0.2
C C:VAL76 3.6 51.4 1.0
CA C:VAL76 4.2 49.0 1.0
C C:THR75 4.2 44.6 1.0
O C:GLY77 4.5 55.9 1.0
N C:GLY77 4.6 57.5 1.0
N C:VAL76 4.8 46.0 1.0
CA C:GLY77 4.9 59.0 1.0
C C:GLY77 5.0 53.4 1.0

Potassium binding site 3 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 3 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K203

b:48.2
occ:0.25
O C:THR75 2.8 39.8 1.0
OG1 C:THR75 3.2 38.1 1.0
K C:K202 3.6 41.8 0.2
CB C:THR75 3.8 46.5 1.0
C C:THR75 3.9 44.6 1.0
C11 C:TBA205 4.3 24.6 0.2
C41 C:TBA205 4.3 24.7 0.2
CA C:THR75 4.5 45.6 1.0
N C:VAL76 4.8 46.0 1.0
N1 C:TBA205 5.0 24.7 0.2

Potassium binding site 4 out of 4 in 8thn

Go back to Potassium Binding Sites List in 8thn
Potassium binding site 4 out of 4 in the Kcsa M96V Mutant with Y78ESTER in High K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Kcsa M96V Mutant with Y78ESTER in High K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K204

b:76.2
occ:0.25
O C:TYF78 4.2 10.2 1.0
K C:K201 4.5 39.5 0.2
CA C:GLY79 4.7 38.8 1.0

Reference:

R.Reddi, S.Chatterjee, K.Matulef, A.Gustafson, L.Gao, F.I.Valiyaveetil. A Facile Approach For Incorporating Tyrosine Esters to Probe Ion-Binding Sites and Backbone Hydrogen Bonds. J.Biol.Chem. V. 300 05517 2023.
ISSN: ESSN 1083-351X
PubMed: 38042487
DOI: 10.1016/J.JBC.2023.105517
Page generated: Tue Aug 13 00:58:42 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy