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Potassium in PDB 8jza: Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin

Protein crystallography data

The structure of Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin, PDB code: 8jza was solved by H.Mistry, J.Kumarasamy, S.Kumari, S.P.Kulkarni, G.D.Gupta, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.24 / 1.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.751, 47.589, 64.237, 90, 90, 90
R / Rfree (%) 13 / 17.4

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin (pdb code 8jza). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin, PDB code: 8jza:

Potassium binding site 1 out of 1 in 8jza

Go back to Potassium Binding Sites List in 8jza
Potassium binding site 1 out of 1 in the Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K204

b:16.0
occ:1.00
O A:PHE69 2.6 14.4 1.0
O A:HOH379 2.8 27.1 1.0
O A:HOH369 2.8 32.0 1.0
O A:LYS66 2.8 15.7 1.0
O A:ALA65 3.0 13.1 1.0
HA A:LYS66 3.1 12.8 1.0
CE2 A:TYR61 3.3 12.7 1.0
CD2 A:TYR61 3.4 13.6 1.0
C A:LYS66 3.4 13.0 1.0
CZ A:TYR61 3.4 11.8 1.0
CG A:TYR61 3.6 12.4 1.0
CE1 A:TYR61 3.6 13.4 1.0
HE2 A:TYR61 3.7 12.7 1.0
CD1 A:TYR61 3.7 12.6 1.0
H A:PHE69 3.7 12.7 1.0
CA A:LYS66 3.7 12.8 1.0
C A:PHE69 3.8 13.9 1.0
HD2 A:TYR61 3.8 12.9 1.0
HA2 A:GLY70 4.0 13.9 1.0
C A:ALA65 4.0 12.3 1.0
OH A:TYR61 4.1 14.3 1.0
HE1 A:TYR61 4.1 12.7 1.0
HD1 A:TYR61 4.2 12.7 1.0
N A:PHE69 4.3 12.4 1.0
N A:LYS66 4.3 12.0 1.0
O A:HOH334 4.4 46.4 1.0
HB2 A:TYR61 4.4 12.6 1.0
N A:ASP67 4.4 13.4 1.0
CB A:TYR61 4.5 12.7 1.0
HB3 A:TYR61 4.6 12.6 1.0
HH A:TYR61 4.6 13.5 1.0
HB2 A:PHE69 4.6 13.2 1.0
CA A:PHE69 4.6 12.7 1.0
H A:ARG68 4.7 13.8 1.0
N A:GLY70 4.7 14.5 1.0
CA A:GLY70 4.8 13.6 1.0
C A:ASP67 4.8 15.0 1.0
N A:ARG68 4.8 13.7 1.0
HA A:ASP67 5.0 14.9 1.0
CB A:LYS66 5.0 13.5 1.0
HB3 A:LYS66 5.0 13.1 1.0

Reference:

H.Mistry, J.Kumarasamy, S.Kumari, S.P.Kulkarni, G.D.Gupta. Crystal Structure of Single Domain Antibody KT75 of Human Thyroglobulin To Be Published.
Page generated: Tue Aug 13 00:09:59 2024

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