Potassium in PDB 8a5i: Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.

The structure of Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. also contains other interesting chemical elements:

Magnesium	(Mg)	165 atoms
Zinc	(Zn)	2 atoms

The binding sites of Potassium atom in the Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. (pdb code 8a5i). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit., PDB code: 8a5i:

Potassium binding site 1 out of 1 in the Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Structure of Lincomycin Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. within 5.0Å range: probe atom residue distance (Å) B Occ P:K201 b:94.9 occ:1.00 O P:ALA122 2.8 62.3 1.0 O P:LEU125 2.8 64.3 1.0 O P:VAL127 3.2 62.7 1.0 OP1 A:G1076 3.7 65.5 1.0 C P:ALA122 3.9 53.1 1.0 C P:LEU125 4.0 53.5 1.0 C P:VAL127 4.1 60.5 1.0 O3' A:A1075 4.1 52.3 1.0 N P:VAL127 4.2 57.9 1.0 CA P:HIS123 4.6 51.6 1.0 O2' A:A1075 4.6 45.9 1.0 N P:LEU125 4.6 50.6 1.0 P A:G1076 4.7 57.0 1.0 N P:HIS123 4.7 50.3 1.0 CA P:LEU125 4.7 52.5 1.0 N P:LYS128 4.8 64.0 1.0 O2' A:G2518 4.8 47.1 1.0 CB P:LEU125 4.8 50.7 1.0 C P:PRO126 4.8 58.2 1.0 CA P:ALA122 4.8 51.0 1.0 CA P:VAL127 4.8 58.5 1.0 N P:PRO126 4.9 56.7 1.0 C P:HIS123 4.9 49.5 1.0 CA P:LYS128 4.9 68.4 1.0 CG2 P:THR129 5.0 70.4 1.0

T.O.Koller, K.J.Turnbull, K.Vaitkevicius, C.Crowe-Mcauliffe, M.Roghanian, O.Bulvas, J.A.Nakamoto, T.Kurata, C.Julius, G.C.Atkinson, J.Johansson, V.Hauryliuk, D.N.Wilson. Structural Basis For Hflxr-Mediated Antibiotic Resistance in Listeria Monocytogenes. Nucleic Acids Res. V. 50 11285 2022.
ISSN: ESSN 1362-4962
PubMed: 36300626
DOI: 10.1093/NAR/GKAC934