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Potassium in PDB 8a57: Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.

Other elements in 8a57:

The structure of Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. also contains other interesting chemical elements:

Magnesium (Mg) 160 atoms
Zinc (Zn) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. (pdb code 8a57). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit., PDB code: 8a57:

Potassium binding site 1 out of 1 in 8a57

Go back to Potassium Binding Sites List in 8a57
Potassium binding site 1 out of 1 in the Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit.


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Structure of Hflxr Bound to the Listeria Monocytogenes 50S Ribosomal Subunit. within 5.0Å range:
probe atom residue distance (Å) B Occ
P:K201

b:65.6
occ:1.00
O P:ALA122 2.8 45.6 1.0
O P:VAL127 2.8 52.4 1.0
O P:LEU125 2.8 46.4 1.0
C P:VAL127 3.8 47.0 1.0
C P:LEU125 3.9 39.3 1.0
C P:ALA122 3.9 39.5 1.0
OP1 A:G1076 3.9 49.1 1.0
N P:VAL127 4.1 46.2 1.0
O3' A:A1075 4.3 41.0 1.0
CB P:LEU125 4.5 37.1 1.0
N P:LEU125 4.6 38.8 1.0
OG1 P:THR129 4.6 62.4 1.0
CA P:LEU125 4.6 40.0 1.0
CA P:VAL127 4.6 46.9 1.0
N P:LYS128 4.6 49.4 1.0
CA P:HIS123 4.7 38.3 1.0
N P:HIS123 4.7 37.7 1.0
C P:PRO126 4.7 44.7 1.0
CA P:ALA122 4.8 35.8 1.0
CA P:LYS128 4.8 52.7 1.0
P A:G1076 4.8 45.3 1.0
N P:PRO126 4.9 41.2 1.0
CB P:ALA122 5.0 36.2 1.0
O2' A:A1075 5.0 37.5 1.0
CG2 P:THR129 5.0 52.2 1.0
C P:HIS123 5.0 36.4 1.0

Reference:

T.O.Koller, K.J.Turnbull, K.Vaitkevicius, C.Crowe-Mcauliffe, M.Roghanian, O.Bulvas, J.A.Nakamoto, T.Kurata, C.Julius, G.C.Atkinson, J.Johansson, V.Hauryliuk, D.N.Wilson. Structural Basis For Hflxr-Mediated Antibiotic Resistance in Listeria Monocytogenes. Nucleic Acids Res. V. 50 11285 2022.
ISSN: ESSN 1362-4962
PubMed: 36300626
DOI: 10.1093/NAR/GKAC934
Page generated: Mon Aug 12 21:58:49 2024

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