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Potassium in PDB 7r0i: Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases

Protein crystallography data

The structure of Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases, PDB code: 7r0i was solved by N.Salustros, C.Groenberg, K.Wang, P.Gourdon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.65 / 2.70
Space group F 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 129.526, 150.098, 218.906, 90, 90, 90
R / Rfree (%) 22.5 / 25.6

Other elements in 7r0i:

The structure of Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases (pdb code 7r0i). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases, PDB code: 7r0i:

Potassium binding site 1 out of 1 in 7r0i

Go back to Potassium Binding Sites List in 7r0i
Potassium binding site 1 out of 1 in the Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structural Basis of Ion Uptake in Copper-Transporting P1B-Type Atpases within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K801

b:86.2
occ:1.00
NZ A:LYS605 3.9 61.6 1.0
OE1 A:GLN608 4.1 59.2 1.0
CD A:GLN608 4.4 61.9 1.0
NE2 A:GLN608 4.6 54.3 1.0
OD1 A:ASP630 4.6 57.6 1.0
CB A:GLN608 4.6 56.8 1.0

Reference:

N.Salustros, C.Gronberg, N.S.Abeyrathna, P.Lyu, F.Oradd, K.Wang, M.Andersson, G.Meloni, P.Gourdon. Structural Basis of Ion Uptake in Copper-Transporting P 1B -Type Atpases. Nat Commun V. 13 5121 2022.
ISSN: ESSN 2041-1723
PubMed: 36045128
DOI: 10.1038/S41467-022-32751-W
Page generated: Mon Aug 12 20:50:41 2024

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