Atomistry » Potassium » PDB 7oup-7pxh » 7phi
Atomistry »
  Potassium »
    PDB 7oup-7pxh »
      7phi »

Potassium in PDB 7phi: Human Voltage-Gated Potassium Channel KV3.1 (with Zn)

Other elements in 7phi:

The structure of Human Voltage-Gated Potassium Channel KV3.1 (with Zn) also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn) (pdb code 7phi). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn), PDB code: 7phi:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 7phi

Go back to Potassium Binding Sites List in 7phi
Potassium binding site 1 out of 4 in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human Voltage-Gated Potassium Channel KV3.1 (with Zn) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K604

b:93.0
occ:1.00
 O C:THR400 3.0 66.4 1.0
O B:THR400 3.1 66.4 1.0
O D:THR400 3.1 66.4 1.0
O A:THR400 3.1 66.4 1.0
OG1 C:THR400 3.5 66.4 1.0
OG1 A:THR400 3.5 66.4 1.0
K A:K605 3.5 72.2 1.0
OG1 D:THR400 3.5 66.4 1.0
OG1 B:THR400 3.5 66.4 1.0
CB C:THR400 3.8 66.4 1.0
CB A:THR400 3.8 66.4 1.0
CB B:THR400 3.9 66.4 1.0
CB D:THR400 3.9 66.4 1.0
C C:THR400 4.0 66.4 1.0
C B:THR400 4.1 66.4 1.0
C D:THR400 4.1 66.4 1.0
C A:THR400 4.1 66.4 1.0
CA C:THR400 4.5 66.4 1.0
CA A:THR400 4.6 66.4 1.0
CA B:THR400 4.6 66.4 1.0
CA D:THR400 4.7 66.4 1.0
CG2 C:THR400 5.0 66.4 1.0
CG2 A:THR400 5.0 66.4 1.0

Potassium binding site 2 out of 4 in 7phi

Go back to Potassium Binding Sites List in 7phi
Potassium binding site 2 out of 4 in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Human Voltage-Gated Potassium Channel KV3.1 (with Zn) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K605

b:72.2
occ:1.00
 O C:LEU401 2.8 63.1 1.0
O D:LEU401 2.8 63.1 1.0
O B:LEU401 2.8 63.1 1.0
O A:LEU401 2.9 63.1 1.0
O A:THR400 2.9 66.4 1.0
O D:THR400 2.9 66.4 1.0
O C:THR400 2.9 66.4 1.0
K A:K606 3.0 79.5 1.0
O B:THR400 3.0 66.4 1.0
K A:K604 3.5 93.0 1.0
C C:LEU401 3.7 63.1 1.0
C D:LEU401 3.7 63.1 1.0
C A:LEU401 3.8 63.1 1.0
C B:LEU401 3.8 63.1 1.0
C A:THR400 4.0 66.4 1.0
C D:THR400 4.0 66.4 1.0
C C:THR400 4.0 66.4 1.0
C B:THR400 4.1 66.4 1.0
CA D:LEU401 4.1 63.1 1.0
CA C:LEU401 4.1 63.1 1.0
CA A:LEU401 4.2 63.1 1.0
CA B:LEU401 4.2 63.1 1.0
N A:LEU401 4.6 63.1 1.0
N D:LEU401 4.6 63.1 1.0
N C:LEU401 4.6 63.1 1.0
N B:LEU401 4.6 63.1 1.0
N C:GLY402 4.8 64.8 1.0
N A:GLY402 4.8 64.8 1.0
N D:GLY402 4.8 64.8 1.0
N B:GLY402 4.8 64.8 1.0
O C:GLY402 4.9 64.8 1.0
O B:GLY402 4.9 64.8 1.0
O D:GLY402 5.0 64.8 1.0
O A:GLY402 5.0 64.8 1.0

Potassium binding site 3 out of 4 in 7phi

Go back to Potassium Binding Sites List in 7phi
Potassium binding site 3 out of 4 in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Human Voltage-Gated Potassium Channel KV3.1 (with Zn) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K606

b:79.5
occ:1.00
 O C:GLY402 2.7 64.8 1.0
O A:GLY402 2.7 64.8 1.0
O D:GLY402 2.7 64.8 1.0
O B:GLY402 2.7 64.8 1.0
O A:LEU401 2.8 63.1 1.0
O D:LEU401 2.8 63.1 1.0
O B:LEU401 2.8 63.1 1.0
O C:LEU401 2.8 63.1 1.0
K A:K605 3.0 72.2 1.0
K A:K607 3.2 70.9 1.0
C C:GLY402 3.7 64.8 1.0
C A:GLY402 3.7 64.8 1.0
C D:GLY402 3.7 64.8 1.0
C B:GLY402 3.7 64.8 1.0
C A:LEU401 3.9 63.1 1.0
C D:LEU401 4.0 63.1 1.0
C C:LEU401 4.0 63.1 1.0
C B:LEU401 4.0 63.1 1.0
CA A:GLY402 4.1 64.8 1.0
CA C:GLY402 4.2 64.8 1.0
CA D:GLY402 4.2 64.8 1.0
CA B:GLY402 4.2 64.8 1.0
N A:GLY402 4.5 64.8 1.0
N C:GLY402 4.6 64.8 1.0
N D:GLY402 4.6 64.8 1.0
N B:GLY402 4.6 64.8 1.0
N C:TYR403 4.7 67.0 1.0
N D:TYR403 4.7 67.0 1.0
N B:TYR403 4.7 67.0 1.0
N A:TYR403 4.8 67.0 1.0

Potassium binding site 4 out of 4 in 7phi

Go back to Potassium Binding Sites List in 7phi
Potassium binding site 4 out of 4 in the Human Voltage-Gated Potassium Channel KV3.1 (with Zn)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Human Voltage-Gated Potassium Channel KV3.1 (with Zn) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K607

b:70.9
occ:1.00
 O C:TYR403 2.8 67.0 1.0
O D:TYR403 2.8 67.0 1.0
O A:TYR403 2.8 67.0 1.0
O B:TYR403 2.8 67.0 1.0
O A:GLY402 2.9 64.8 1.0
O D:GLY402 2.9 64.8 1.0
O C:GLY402 3.0 64.8 1.0
O B:GLY402 3.0 64.8 1.0
K A:K606 3.2 79.5 1.0
C D:TYR403 3.5 67.0 1.0
C A:TYR403 3.5 67.0 1.0
C C:TYR403 3.5 67.0 1.0
C B:TYR403 3.6 67.0 1.0
C A:GLY402 4.0 64.8 1.0
C D:GLY402 4.0 64.8 1.0
CA D:TYR403 4.1 67.0 1.0
CA A:TYR403 4.1 67.0 1.0
C C:GLY402 4.1 64.8 1.0
CA B:TYR403 4.1 67.0 1.0
CA C:TYR403 4.1 67.0 1.0
C B:GLY402 4.1 64.8 1.0
N A:GLY404 4.4 70.2 1.0
N C:GLY404 4.4 70.2 1.0
N D:GLY404 4.4 70.2 1.0
N B:GLY404 4.5 70.2 1.0
N A:TYR403 4.5 67.0 1.0
N D:TYR403 4.5 67.0 1.0
N C:TYR403 4.6 67.0 1.0
N B:TYR403 4.6 67.0 1.0
CA C:GLY404 4.8 70.2 1.0
CA A:GLY404 4.8 70.2 1.0
CA D:GLY404 4.8 70.2 1.0
CA B:GLY404 4.9 70.2 1.0

Reference:

G.Chi, Q.Liang, A.Sridhar, J.B.Cowgill, K.Sader, M.Radjainia, P.Qian, P.Castro-Hartmann, S.Venkaya, N.K.Singh, G.Mckinley, A.Fernandez-Cid, S.M.M.Mukhopadhyay, N.A.Burgess-Brown, L.Delemotte, M.Covarrubias, K.L.Durr. Cryo-Em Structure of the Human KV3.1 Channel Reveals Gating Control By the Cytoplasmic T1 Domain. Nat Commun V. 13 4087 2022.
ISSN: ESSN 2041-1723
PubMed: 35840580
DOI: 10.1038/S41467-022-29594-W
Page generated: Wed Apr 5 09:49:32 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy