Potassium in PDB 7kcm: Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp

The structure of Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Iron	(Fe)	2 atoms

The binding sites of Potassium atom in the Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp (pdb code 7kcm). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp, PDB code: 7kcm:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ A:K803 b:49.1 occ:1.00 O A:GLY202 2.8 52.8 1.0 O A:ASN171 2.8 55.6 1.0 OH A:TYR206 2.9 45.5 1.0 O A:THR174 3.1 48.7 1.0 O A:ARG177 3.1 53.0 1.0 CE2 A:TYR206 3.2 45.5 1.0 C5' A:ANP801 3.2 63.5 1.0 CZ A:TYR206 3.3 45.5 1.0 C A:GLY202 3.8 52.8 1.0 C A:ASN171 3.8 55.6 1.0 O1A A:ANP801 3.9 63.5 1.0 O5' A:ANP801 4.2 63.5 1.0 C A:ARG177 4.2 53.0 1.0 C A:THR174 4.3 48.7 1.0 CA A:GLY202 4.3 52.8 1.0 CD2 A:TYR206 4.4 45.5 1.0 C4' A:ANP801 4.4 63.5 1.0 N A:ARG177 4.4 53.0 1.0 O A:LEU172 4.4 51.8 1.0 CA A:LEU172 4.5 51.8 1.0 CE1 A:TYR206 4.5 45.5 1.0 PA A:ANP801 4.5 63.5 1.0 N A:LEU172 4.6 51.8 1.0 N A:ALA176 4.7 48.7 1.0 C A:LEU172 4.7 51.8 1.0 CA A:ASN171 4.7 55.6 1.0 O3A A:ANP801 4.8 63.5 1.0 CA A:ARG177 4.8 53.0 1.0 N A:VAL203 4.8 46.2 1.0 CA A:ILE175 4.9 47.9 1.0

Potassium binding site 2 out of 2 in the Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Full-Length Human Mitochondrial HSP90 (TRAP1) in Complex with Sdhb in the Presence of Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ B:K803 b:52.5 occ:1.00 O B:GLY202 2.8 45.3 1.0 O B:ASN171 2.8 51.9 1.0 OH B:TYR206 2.9 40.3 1.0 O B:ARG177 2.9 49.1 1.0 O B:THR174 3.0 47.0 1.0 C5' B:ANP801 3.3 50.7 1.0 CE2 B:TYR206 3.4 40.3 1.0 CZ B:TYR206 3.4 40.3 1.0 C B:GLY202 3.7 45.3 1.0 O1A B:ANP801 3.8 50.7 1.0 C B:ASN171 3.8 51.9 1.0 C B:ARG177 3.9 49.1 1.0 N B:ARG177 4.0 49.1 1.0 O5' B:ANP801 4.1 50.7 1.0 CA B:GLY202 4.2 45.3 1.0 C B:THR174 4.2 47.0 1.0 C4' B:ANP801 4.4 50.7 1.0 CA B:ARG177 4.4 49.1 1.0 PA B:ANP801 4.5 50.7 1.0 N B:ALA176 4.5 44.5 1.0 CD2 B:TYR206 4.6 40.3 1.0 CE1 B:TYR206 4.6 40.3 1.0 O B:LEU172 4.7 48.2 1.0 CA B:LEU172 4.7 48.2 1.0 CA B:ASN171 4.7 51.9 1.0 N B:LEU172 4.7 48.2 1.0 O3A B:ANP801 4.7 50.7 1.0 CA B:ILE175 4.8 47.4 1.0 CB B:ARG177 4.8 49.1 1.0 N B:VAL203 4.8 41.2 1.0 C B:LEU172 4.9 48.2 1.0 C B:ILE175 4.9 47.4 1.0 N B:ILE175 4.9 47.4 1.0 N B:SER178 5.0 52.4 1.0

Y.X.Liu, D.A.Agard, D.Elnatan, M.Sun, A.G.Myasnikov. Cryo-Em Reveals the Dynamic Interplay Between Mitochondrial HSP90 and Sdhb Folding Intermediates To Be Published.